Miscellaneous utilities

cmp

Comparison of results is to seed from cmp.sh.

This is to remove nonactive (non-Cardio, NR>4) empty directories,

ls -t | awk 'NR>4' | parallel -C' ' 'rmdir {}'

The exon_reg group is particularly slow (~10hr each) and we attempted to let faster groups done first and hold it with

scontrol hold 46817784_[29-368]

the array indexes were necessary since _22 was already done.

We have from squeue -u $USER

46817784_[29-368] cclake-hi     _rva    jhz22 PD       0:00      1 (JobHeldUser,None)

and restore the jobs with

scontrol release 46817784

to get

46817784_[29-368] cclake-hi     _rva    jhz22 PD       0:00      1 (Priority,QOSMaxCpuPerUserLimit)

This is appropriate since some cclake jobs were furnished with cardio.

scancel 46817784_[250-299]

They were then dropped according to squeue -u $USER.