Programs

SequenceFilenameDescription
1weswgs.shWES/WGS preprocessing
2.1spa.shSingle-point analysis
2.2rva.shRare-variant analysis

Remarks on variant lists and results submitted centrally are described in INTERVAL.md.

Diagram

We now expect to see a diagram here, simply because GitHub supports them.

graph TB; setup ==> 1 ==> 2; 1 --> idmap.do; 1 --> wgs.wrap; 2 --> 2.1 --> spa.sb; 2.1 --> bgen.sb; 2 --> 2.2 --> wes.R; 2.2 --> wgs.R; 2.2 --> weswgs.R; 2.2 --> rva.sb; 2.2 --> prune.wrap;

Otherwise, `mermaid.min.js` needs to be explicitly loaded within the `.html` file, as shown below.