Package index
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pQTLtoolspQTLtools-package - A reference manual
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csq() - Variant consequence
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genequeries() - phenoscanner genequeries in batches
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get.prop.below.LLOD() - Limit of detection analysis
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import_OpenGWAS() - Import OpenGWAS
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import_eQTLCatalogue() - Import eQTL Catalogue
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make_ExpressionSet() - A call to expressionSet class
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novelty_check() - Locus novelty check
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peptideAssociationPlot() - peptide association plot
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peptideMapping() - peptide-to-protein mapping
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pqtlMR() - Basic pQTL-MR analysis
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protein_altering_variants - Protein-altering variants
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qtl_lookup() - QTL lookup
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regionqueries() - phenoscanner regionqueries in batches
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run_coloc() - Colocalisation analysis
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run_TwoSampleMR() - Basic TwoSampleMR analysis
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snpqueries() - phenoscanner snpqueries in batches
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turboman() - Manhattan plots
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turboqq() - QQ plots
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uniprot2ids() - UniProt IDs to others